Näytä suppeat kuvailutiedot

Radiogenomic Analysis of Papillary Thyroid Carcinoma for Prediction of Cervical Lymph Node Metastasis: A Preliminary Study

Yu Jinhua; Wang Yulong; Tong Yuyang; Wang Yu; Chang Cai; Yong Juanjuan; Zhou Shichong; Guo Yi; Wang Yuanyan; Ji Qinghai; Zhang Hongbo; Huang Yunxia; Sun Peixuan.

dc.contributor.authorYu Jinhua
dc.contributor.authorWang Yulong
dc.contributor.authorTong Yuyang
dc.contributor.authorWang Yu
dc.contributor.authorChang Cai
dc.contributor.authorYong Juanjuan
dc.contributor.authorZhou Shichong
dc.contributor.authorGuo Yi
dc.contributor.authorWang Yuanyan
dc.contributor.authorJi Qinghai
dc.contributor.authorZhang Hongbo
dc.contributor.authorHuang Yunxia
dc.contributor.authorSun Peixuan.
dc.date.accessioned2022-10-27T12:15:41Z
dc.date.available2022-10-27T12:15:41Z
dc.identifier.urihttps://www.utupub.fi/handle/10024/157379
dc.description.abstractBackground Papillary thyroid carcinoma (PTC) is characterized by frequent metastases to cervical lymph nodes (CLNs), and the presence of lymph node metastasis at diagnosis has a significant impact on the surgical approach. Therefore, we established a radiomic signature to predict the CLN status of PTC patients using preoperative thyroid ultrasound, and investigated the association between the radiomic features and underlying molecular characteristics of PTC tumors. Methods In total, 270 patients were enrolled in this prospective study, and radiomic features were extracted according to multiple guidelines. A radiomic signature was built with selected features in the training cohort and validated in the validation cohort. The total protein extracted from tumor samples was analyzed with LC/MS and iTRAQ technology. Gene modules acquired by clustering were chosen for their diagnostic significance. A radiogenomic map linking radiomic features to gene modules was constructed with the Spearman correlation matrix. Genes in modules related to metastasis were extracted for Gene Ontology (GO) and Kyoto Encyclopedia of Genes and Genomes (KEGG) pathway enrichment analyses, and a protein-protein interaction (PPI) network was built to identify the hub genes in the modules. Finally, the screened hub genes were validated by immunohistochemistry analysis. Results The radiomic signature showed good performance for predicting CLN status in training and validation cohorts, with area under curve of 0.873 and 0.831 respectively. A radiogenomic map was created with nine significant correlations between radiomic features and gene modules, and two of them had higher correlation coefficient. Among these, MEmeganta representing the upregulation of telomere maintenance via telomerase and cell-cell adhesion was correlated with 'Rectlike' and 'deviation ratio of tumor tissue and normal thyroid gland' which reflect the margin and the internal echogenicity of the tumor, respectively. MEblue capturing cell-cell adhesion and glycolysis was associated with feature 'minimum calcification area' which measures the punctate calcification. The hub genes of the two modules were identified by protein-protein interaction network. Immunohistochemistry validated that LAMC1 and THBS1 were differently expressed in metastatic and non-metastatic tissues (p=0.003; p=0.002). And LAMC1 was associated with feature 'Rectlike' and 'deviation ratio of tumor and normal thyroid gland' (p<0.001; p<0.001); THBS1 was correlated with 'minimum calcification area' (p<0.001). Conclusions The radiomic signature proposed here has the potential to noninvasively predict the CLN status in PTC patients. Merging imaging phenotypes with genomic data could allow noninvasive identification of the molecular properties of PTC tumors, which might support clinical decision making and personalized management.
dc.language.isoen
dc.publisherFRONTIERS MEDIA SA
dc.titleRadiogenomic Analysis of Papillary Thyroid Carcinoma for Prediction of Cervical Lymph Node Metastasis: A Preliminary Study
dc.identifier.urnURN:NBN:fi-fe2021093048080
dc.relation.volume11
dc.contributor.organizationfi=biotiedekeskuksen yhteiset|en=Biotiedekeskuksen yhteiset|
dc.contributor.organization-code2609200
dc.converis.publication-id66687593
dc.converis.urlhttps://research.utu.fi/converis/portal/Publication/66687593
dc.identifier.eissn2234-943X
dc.identifier.jour-issn2234-943X
dc.okm.affiliatedauthorZhang, Hongbo
dc.okm.discipline3111 Biolääketieteetfi_FI
dc.okm.discipline3111 Biomedicineen_GB
dc.okm.internationalcopublicationinternational co-publication
dc.okm.internationalityInternational publication
dc.okm.typeJournal article
dc.publisher.countrySwitzerlanden_GB
dc.publisher.countrySveitsifi_FI
dc.publisher.country-codeCH
dc.relation.articlenumber682998
dc.relation.doi10.3389/fonc.2021.682998
dc.relation.ispartofjournalFrontiers in Oncology
dc.year.issued2021


Aineistoon kuuluvat tiedostot

Thumbnail

Aineisto kuuluu seuraaviin kokoelmiin

Näytä suppeat kuvailutiedot